This web wil run HLA typing tools: e.g. hisat2,Kourami,bwa-kit
The fastq should smaller than 1G, otherwise it'll timeout and fail, you may need to run some preprocessing to extract the HLA-related reads.
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Lee, H., & Kingsford, C. Kourami: graph-guided assembly for novel human leukocyte antigen allele discovery. Genome Biology 19(16), 2018
Kim, D., Paggi, J.M., Park, C. et al. Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype. Nat Biotechnol 37, 907–915 (2019).
Li H. (2013) Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM. arXiv:1303.3997v2 [q-bio.GN]. (if you use the BWA-MEM algorithm or the fastmap command, or want to cite the whole BWA package)
Author: linnil1